@article{Klinger:nb5151,
author = "Klinger, Miloslav and J{\"{a}}ger, Ale{\v{s}}",
title = "{{\it Crystallographic Tool Box} ({\it CrysTBox}): automated tools for transmission electron microscopists and crystallographers}",
journal = "Journal of Applied Crystallography",
year = "2015",
volume = "48",
number = "6",
pages = "2012--2018",
month = "Dec",
doi = {10.1107/S1600576715017252},
url = {https://doi.org/10.1107/S1600576715017252},
abstract = {Three tools for an automated analysis of electron diffraction pattern and crystallographic visualization are presented. Firstly, {\it diffractGUI} determines the zone axis from selected area diffraction, convergent beam diffraction or nanodiffraction patterns and allows for indexing of individual reflections. Secondly, {\it ringGUI} identifies crystallographic planes corresponding to the depicted rings in the ring diffraction pattern and can select the sample material from a list of candidates. Both {\it diffractGUI} and {\it ringGUI} employ methods of computer vision for a fast, robust and accurate analysis. Thirdly, {\it cellViewer} is an intuitive visualization tool which is also helpful for crystallographic calculations or educational purposes. {\it diffractGUI} and {\it cellViewer} can be used together during a transmission electron microscopy session to determine the sample holder tilts required to reach a desired zone axis. All the tools offer a graphical user interface. The toolbox is distributed as a standalone application, so it can be installed on the microscope computer and launched directly from {\it DigitalMicrograph} (Gatan Inc.).},
keywords = {electron diffraction, automated analysis, transmission electron microscopy, high-resolution transmission electron microscopy},
}